Arabidopsis Small RNA Project
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[miRNA #, dbe #, sequence or locus identifier (AtXgXXXXX)]


miRNA Reads
Tissue Loci Reads
(.csv Spreadsheet)		 Normalized Loci Reads
(.csv Spreadsheet)		 Family Reads
(.csv Spreadsheet)
454
Inflorescence miRNA_Inflorescence.csv miRNA_Normalized_Inflorescence.csv miRNA_Family_Inflorescence.csv
Seedling miRNA_Seedling.csv miRNA_Normalized_Seedling.csv miRNA_Family_Seedling.csv
Leaf miRNA_Leaf.csv miRNA_Normalized_Leaf.csv miRNA_Family_Leaf.csv
Illumina
Col-0 (Leaf) miRNA_M1_Col-0_Leaf_illumina.csv miRNA_M1_Col-0_Leaf_illumina_Normalized.csv miRNA_M1_Col-0_Leaf_illumina_Family.csv
Col-0 (whole plant) miRNA_4dpi_Col-0_plant_illumina.csv miRNA_4dpi_Col-0_plant_illumina_Normalized.csv miRNA_4dpi_Col-0_plant_illumina_Family.csv
dcl1 (whole plant) miRNA_4dpi_dcl1_plant_illumina.csv miRNA_4dpi_dcl1_plant_illumina_Normalized.csv miRNA_4dpi_dcl1_plant_illumina_Family.csv
dcl2/3/4 (whole plant) miRNA_4dpi_dcl2-3-4_plant_illumina.csv miRNA_4dpi_dcl2-3-4_plant_illumina_Normalized.csv miRNA_4dpi_dcl2-3-4_plant_illumina_Family.csv

TAS Reads
Tissue Loci Reads
(.csv Spreadsheet)		 Normalized Loci Reads
(.csv Spreadsheet)		 Family Reads
(.csv Spreadsheet)
454
Inflorescence TAS_Inflorescence.csv TAS_Normalized_Inflorescence.csv TAS_Family_Inflorescence.csv
Seedling TAS_Seedling.csv TAS_Normalized_Seedling.csv TAS_Family_Seedling.csv
Leaf TAS_Leaf.csv TAS_Normalized_Leaf.csv TAS_Family_Leaf.csv
Illumina
Col-0 (Leaf) TAS_M1_Col-0_Leaf_illumina.csv TAS_M1_Col-0_Leaf_illumina_Normalized.csv TAS_M1_Col-0_Leaf_illumina_Family.csv
Col-0 (whole plant) TAS_4dpi_Col-0_plant_illumina.csv TAS_4dpi_Col-0_plant_illumina_Normalized.csv TAS_4dpi_Col-0_plant_illumina_Family.csv
dcl1 (whole plant) TAS_4dpi_dcl1_plant_illumina.csv TAS_4dpi_dcl1_plant_illumina_Normalized.csv TAS_4dpi_dcl1_plant_illumina_Family.csv
dcl2/3/4 (whole plant) TAS_4dpi_dcl2-3-4_plant_illumina.csv TAS_4dpi_dcl2-3-4_plant_illumina_Normalized.csv TAS_4dpi_dcl2-3-4_plant_illumina_Family.csv

All Small RNA Reads
Tissue Library Read Loci
(.gff format)		 Read Sequences
(.fasta format)
454
Inflorescence Col-0 Col-0_Inflorescence.gff Col-0_Inflorescence.fasta
rdr1 rdr1_Inflorescence.gff rdr1_Inflorescence.fasta
rdr2 rdr2_Inflorescence.gff rdr2_Inflorescence.fasta
rdr6 rdr6_Inflorescence.gff rdr6_Inflorescence.fasta
dcl1 dcl1_Inflorescence.gff dcl1_Inflorescence.fasta
dcl2 dcl2_Inflorescence.gff dcl2_Inflorescence.fasta
dcl3 dcl3_Inflorescence.gff dcl3_Inflorescence.fasta
dcl4 dcl4_Inflorescence.gff dcl4_Inflorescence.fasta
Seedling Col-0 Col-0_Seedling.gff Col-0_Seedling.fasta
rdr6 rdr6_Seedling.gff rdr6_Seedling.fasta
Leaf Col-0 Col-0_Leaf.gff Col-0_Leaf.fasta
  OSU1 composite OSU1_composite.gff OSU1_composite.fasta
Illumina
Col-0 (Leaf) M1 M1_Col-0_Leaf_illumina.gff M1_Col-0_Leaf_illumina.fasta
Col-0 (whole plant) 4dpi 4dpi_Col-0_plant_illumina.gff 4dpi_Col-0_plant_illumina.fasta
dcl1 (whole plant) 4dpi 4dpi_dcl1_plant_illumina.gff 4dpi_dcl1_plant_illumina.fasta
dcl2/3/4 (whole plant) 4dpi 4dpi_dcl2-3-4_plant_illumina.gff 4dpi_dcl2-3-4_plant_illumina.fasta



The ASRP website organizes information about Arabidopsis thaliana small RNAs. It is funded by NSF as a 2010 project. All small RNAs have either been isolated by the ASRP or published by other labs.